Sequence Similarity Clusters for the Entities in PDB 1GZP

Entity #1 | Chains: A
T-CELL SURFACE GLYCOPROTEIN CD1B protein, length: 300 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 10 5693
95 % 9 11 5651
90 % 9 11 5670
70 % 11 13 3732
50 % 68 97 422
40 % 68 97 450
30 % 770 897 15
Entity #2 | Chains: B
B2-MICROGLOBULIN protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 552 618 2
95 % 592 662 3 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 1.0
PDBFlex
90 % 601 671 4
70 % 795 914 4
50 % 809 936 3
40 % 809 936 7
30 % 809 936 12

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5WL1 1 A T-cell surface glycoprotein CD1b 9606
2 3GMO 1 A T-cell surface glycoprotein CD1d1 UNP residues 19-297 10090
3 5L2J 1 A T-cell surface glycoprotein CD1b 9606
4 3G08 1 A T-cell surface glycoprotein CD1d1 UNP residues 19-298 10090
5 3GMP 1 A T-cell surface glycoprotein CD1d1 UNP residues 19-297 10090
6 3GML 1 A T-cell surface glycoprotein CD1d1 UNP residues 19-297 10090
7 3GMN 1 A T-cell surface glycoprotein CD1d1 UNP residues 19-297 10090
8 3T1F 1 A Antigen-presenting glycoprotein CD1d1 UNP residues 19-298 10090
9 5WKE 1 A T-cell surface glycoprotein CD1b 9606
10 3GMM 1 A T-cell surface glycoprotein CD1d1 UNP residues 19-297 10090
11 3GMQ 1 A T-cell surface glycoprotein CD1d1 UNP residues 19-297 10090
12 5TW2 1 A Antigen-presenting glycoprotein CD1d1 10090
13 3T8X 1 A, C T-cell surface glycoprotein CD1b UNP residues 19-298 9606
14 5J1A 1 A T-cell surface glycoprotein CD1a 9606
15 5FKP 1 A ANTIGEN-PRESENTING GLYCOPROTEIN CD1D1 10090
16 2H26 1 A T-cell surface glycoprotein CD1b extracellular domain of CD1b antigen 9606
17 2FIK 1 A T-cell surface glycoprotein CD1d1 extracellular domain of CD1d, residues 19-297 10090
18 2AKR 1 A, C T-cell surface glycoprotein CD1d1 extracellular domain, residues 19-297 10090
19 3GMR 1 A T-cell surface glycoprotein CD1d1 UNP residues 19-297 10090
20 5EFI 1 A Antigen-presenting glycoprotein CD1d1 10090
21 3ILP 1 A T-cell surface glycoprotein CD1d1 UNP residues 19-298 10090
22 4X6F 1 A T-cell surface glycoprotein CD1a 9606
23 5TW5 1 A Antigen-presenting glycoprotein CD1d1 10090
24 2Q7Y 1 A, C T-cell surface glycoprotein CD1d1 residues 19-297 10090
25 5WKG 1 A T-cell surface glycoprotein CD1b 9606
26 4X6E 1 A T-cell surface glycoprotein CD1a 9606
27 3ILQ 1 C T-cell surface glycoprotein CD1d1 UNP residues 19-298 10090
28 5C9J 1 A T-cell surface glycoprotein CD1c,T-cell surface glycoprotein CD1b 9606
29 3QUY 1 A Antigen-presenting glycoprotein CD1d1 UNP residues 19-297 10090
30 3RUG 1 A, C Antigen-presenting glycoprotein CD1d1 extracellular domain 10090
31 3QUZ 1 A Antigen-presenting glycoprotein CD1d1 UNP residues 19-297 10090
32 1GZQ 1 A T-CELL SURFACE GLYCOPROTEIN CD1B RESIDUES 18-295 9606
33 1ONQ 1 A, C T-cell surface glycoprotein CD1a 9606
34 3L9R 1 A, C, E, G CD1b3 UNP residues 19-295 9913
35 4MX7 1 A Antigen-presenting glycoprotein CD1d1 CD1d ectdomain, UNP residues 19-297 10090
36 1Z5L 1 A, C T-cell surface glycoprotein CD1d antigen extracellular domain 10090
37 4WW2 3 C Antigen-presenting glycoprotein CD1d 9606
38 4WO4 1 A Antigen-presenting glycoprotein CD1d 9606
39 3AU1 1 A Antigen-presenting glycoprotein CD1d1 extracellular domain 10090
40 3MA7 1 A, C T-cell surface glycoprotein CD1d1 UNP RESIDUES 19-297 10090
41 4F7E 1 A CD1D antigen, d polypeptide UNP residues 129-405 9913
42 3QI9 1 A Antigen-presenting glycoprotein CD1d1 residues in UNP 19-297 10090
43 3HUJ 1 A, C T-cell surface glycoprotein CD1d UNP residues 21-295 9606
44 4X6C 1 A, C T-cell surface glycoprotein CD1a 9606
45 4EN3 1 C Antigen-presenting glycoprotein CD1d UNP residues 21-295 9606
46 4Y16 1 A Antigen-presenting glycoprotein CD1d1 Ectodomain, UNP residues 19-297 10090
47 2GAZ 1 A T-cell surface glycoprotein CD1d1 extracellular domain, residues 19-297 10090
48 3O8X 1 A Antigen-presenting glycoprotein CD1d1 residues 19-297 10090
49 4IRS 1 A Antigen-presenting glycoprotein CD1d1 UNP residues 19-298 10090
50 3TA3 1 A Antigen-presenting glycoprotein CD1d1 Residues 19-297 10090
51 4MQ7 1 A Antigen-presenting glycoprotein CD1d, Cd1d1 protein human CD1d alpha1,2 domains fused with murine alpha3 domain 10090
52 3O9W 1 A Antigen-presenting glycoprotein CD1d1 10090
53 4X6D 1 A, C T-cell surface glycoprotein CD1a 9606
54 3ARB 1 A Antigen-presenting glycoprotein CD1d1 heavy chain 10090
55 4MNG 2 A, C Cd1d1 protein CD1d,CD1d 10090
56 4APQ 1 A ANTIGEN-PRESENTING GLYCOPROTEIN CD1D1 EXTRACELLULAR DOMAIN, RESIDUES 19-297 10090
57 5WKI 1 A T-cell surface glycoprotein CD1b 9606
58 3VWK 1 A Antigen-presenting glycoprotein CD1d UNP residues 21-295 9606
59 4IRJ 1 A Antigen-presenting glycoprotein CD1d1 UNP residues 19-298 10090
60 3U0P 1 A, C, E Antigen-presenting glycoprotein CD1d 9606
61 4LHU 1 A Antigen-presenting glycoprotein CD1d 9606
62 1XZ0 1 A, C T-cell surface glycoprotein CD1a 9606
63 4ZAK 1 A Antigen-presenting glycoprotein CD1d1 10090
64 1ZHN 1 A CD1d1 antigen Self phospholipid copurified with protein 10090
65 4Y4K 1 A Antigen-presenting glycoprotein CD1d1 Ectodomain, UNP residues 19-297 10090
66 3ARE 1 A Antigen-presenting glycoprotein CD1d1 heavy chain 10090
67 3QUX 1 A Antigen-presenting glycoprotein CD1d1 UNP residues 19-297 10090
68 1GZP 1 A T-CELL SURFACE GLYCOPROTEIN CD1B RESIDUES 18-295 9606
69 3HE7 1 A T-cell surface glycoprotein CD1d1 extracellular domain 10090
70 3TVM 1 A, E Antigen-presenting glycoprotein CD1d1 residues 19-298 10090
71 3RTQ 1 A Antigen-presenting glycoprotein CD1d1 UNP residues 19-297 10090
72 3SCM 1 A Antigen-presenting glycoprotein CD1d1 extracellular domain, UNP residues 19-297 10090
73 4WWK 3 C Antigen-presenting glycoprotein CD1d 9606
74 4F7C 1 A, C CD1D antigen, d polypeptide UNP residues 129-405 9913
75 4EI5 1 A, E Antigen-presenting glycoprotein CD1d1 UNP residues 19-297 10090
76 3RZC 1 A Antigen-presenting glycoprotein CD1d1 19-298 10090
77 3UBX 1 A, D Antigen-presenting glycoprotein CD1d1 UNP residues 19-297 10090
78 3ARF 1 A Antigen-presenting glycoprotein CD1d1 heavy chain 10090
79 3ARD 1 A Antigen-presenting glycoprotein CD1d1 heavy chain 10090
80 4Y2D 1 A, E Antigen-presenting glycoprotein CD1d1 Ectodomain, UNP residues 19-297 10090
81 3HE6 1 A T-cell surface glycoprotein CD1d1 extracellular domain 10090
82 3TO4 1 A Antigen-presenting glycoprotein CD1d1 UNP residues 19-297 10090
83 1ZT4 1 A, C T-cell surface glycoprotein CD1d CD1d heavy chain 9606
84 3ARG 1 A Antigen-presenting glycoprotein CD1d1 heavy chain 10090
85 4Y4F 1 A, E Antigen-presenting glycoprotein CD1d1 Ectodomain, UNP residues 19-297 10090
86 5L2K 1 A T-cell surface glycoprotein CD1b 9606
87 3VWJ 1 A Antigen-presenting glycoprotein CD1d UNP residues 21-295 9606
88 3TZV 3 C Antigen-presenting glycoprotein CD1d 9606
89 1UQS 1 A T-CELL SURFACE GLYCOPROTEIN CD1B FRAGMENT: RESIDUES 18-295 9606
90 3SDX 1 A, C Antigen-presenting glycoprotein CD1d extracellular domain, UNP residues 24-295 9606
91 3TN0 1 A Antigen-presenting glycoprotein CD1d1 UNP residues 19-297 10090
92 2PO6 1 A, E T-cell surface glycoprotein CD1d 9606
93 3SDA 1 A Antigen-presenting glycoprotein CD1d1 extracellular domain, UNP residues 19-297 10090
94 3SDC 1 A Antigen-presenting glycoprotein CD1d1 extracellular domain, UNP residues 19-297 10090
95 4Y4H 1 A, E Antigen-presenting glycoprotein CD1d1 Ectodomain, UNP residues 19-297 10090
96 4ELM 1 A, C Antigen-presenting glycoprotein CD1d1 10090
97 3SDD 1 A Antigen-presenting glycoprotein CD1d1 extracellular domain, UNP residues 19-297 10090