Sequence Similarity Clusters for the Entities in PDB 1GZM

Entity #1 | Chains: A,B
RHODOPSIN protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 37 836
95 % 10 41 950 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 1.8
PDBFlex
90 % 10 41 977
70 % 10 41 1012
50 % 10 41 1063
40 % 10 41 1068
30 % 10 41 1070

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures