Sequence Similarity Clusters for the Entities in PDB 1GZL

Entity #1 | Chains: A,B
FUSION PROTEIN BETWEEN THE HYDROPHOBIC POCKET OF HIV GP41 AND GENERAL CONTROL PROTEIN GCN4-PIQI protein, length: 46 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 12 1267
95 % 10 12 1742
90 % 10 12 1778
70 % 10 12 1808
50 % 10 12 1845
40 % 10 12 1860
30 % 10 12 1789
Entity #2 | Chains: C,D
ENVELOPE GLYCOPROTEIN GP41 protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.