Sequence Similarity Clusters for the Entities in PDB 1GZL

Entity #1 | Chains: A,B
FUSION PROTEIN BETWEEN THE HYDROPHOBIC POCKET OF HIV GP41 AND GENERAL CONTROL PROTEIN GCN4-PIQI protein, length: 46 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 12 1514
95 % 10 12 2032
90 % 10 12 2081
70 % 10 12 2095
50 % 11 14 1524
40 % 11 14 1540
30 % 11 14 1509
Entity #2 | Chains: C,D
ENVELOPE GLYCOPROTEIN GP41 protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures