Sequence Similarity Clusters for the Entities in PDB 1GZL

Entity #1 | Chains: A,B
FUSION PROTEIN BETWEEN THE HYDROPHOBIC POCKET OF HIV GP41 AND GENERAL CONTROL PROTEIN GCN4-PIQI protein, length: 46 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 12 1549
95 % 10 12 2089
90 % 10 12 2141
70 % 10 12 2149
50 % 11 16 1287
40 % 11 16 1302
30 % 11 16 1271
Entity #2 | Chains: C,D
ENVELOPE GLYCOPROTEIN GP41 protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures