Sequence Similarity Clusters for the Entities in PDB 1GZH

Entity #1 | Chains: A
CELLULAR TUMOR ANTIGEN P53 protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 62987
95 % 77 82 169 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.8
PDBFlex
90 % 78 83 176
70 % 85 91 182
50 % 90 106 168
40 % 90 106 183
30 % 90 106 196
Entity #2 | Chains: B,D
TUMOR SUPPRESSOR P53-BINDING PROTEIN 1 protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 12824
95 % 2 3 12377 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.7
PDBFlex
90 % 2 3 12204
70 % 2 3 11530
50 % 2 3 10320
40 % 2 3 9372
30 % 2 3 8184
Entity #3 | Chains: C
CELLULAR TUMOR ANTIGEN P53 protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 20 24 510
95 % 78 82 169 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.8
PDBFlex
90 % 79 83 176
70 % 86 91 182
50 % 91 106 168
40 % 91 106 183
30 % 91 106 196

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures