Sequence Similarity Clusters for the Entities in PDB 1GZH

Entity #1 | Chains: A
CELLULAR TUMOR ANTIGEN P53 protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 63728
95 % 77 82 171 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.8
PDBFlex
90 % 78 83 179
70 % 85 91 186
50 % 90 106 172
40 % 90 106 185
30 % 90 106 198
Entity #2 | Chains: B,D
TUMOR SUPPRESSOR P53-BINDING PROTEIN 1 protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 13019
95 % 2 3 12559 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.7
PDBFlex
90 % 2 3 12381
70 % 2 3 11688
50 % 2 3 10455
40 % 2 3 9490
30 % 2 3 8289
Entity #3 | Chains: C
CELLULAR TUMOR ANTIGEN P53 protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 20 24 517
95 % 78 82 171 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.8
PDBFlex
90 % 79 83 179
70 % 86 91 186
50 % 91 106 172
40 % 91 106 185
30 % 91 106 198

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures