Sequence Similarity Clusters for the Entities in PDB 1GZH

Entity #1 | Chains: A
CELLULAR TUMOR ANTIGEN P53 protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 30 35 407
95 % 93 98 145 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.8
PDBFlex
90 % 94 99 155
70 % 101 107 168
50 % 108 128 144
40 % 108 128 156
30 % 108 128 171
Entity #2 | Chains: B,D
TUMOR SUPPRESSOR P53-BINDING PROTEIN 1 protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 13449
95 % 2 3 12731 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.7
PDBFlex
90 % 2 3 12537
70 % 2 3 11816
50 % 2 3 10547
40 % 2 3 9522
30 % 2 3 8162
Entity #3 | Chains: C
CELLULAR TUMOR ANTIGEN P53 protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 31 35 407
95 % 94 98 145 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.8
PDBFlex
90 % 95 99 155
70 % 102 107 168
50 % 109 128 144
40 % 109 128 156
30 % 109 128 171

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures