Sequence Similarity Clusters for the Entities in PDB 1GZH

Entity #1 | Chains: A
CELLULAR TUMOR ANTIGEN P53 protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59982
95 % 77 82 154 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.8
PDBFlex
90 % 78 83 164
70 % 85 91 176
50 % 90 106 156
40 % 90 106 174
30 % 90 106 187
Entity #2 | Chains: B,D
TUMOR SUPPRESSOR P53-BINDING PROTEIN 1 protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 12132
95 % 2 3 11737 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.7
PDBFlex
90 % 2 3 11573
70 % 2 3 10925
50 % 2 3 9805
40 % 2 3 8908
30 % 2 3 7771
Entity #3 | Chains: C
CELLULAR TUMOR ANTIGEN P53 protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 20 24 471
95 % 78 82 154 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.8
PDBFlex
90 % 79 83 164
70 % 86 91 176
50 % 91 106 156
40 % 91 106 174
30 % 91 106 187

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.