Sequence Similarity Clusters for the Entities in PDB 1GYT

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
CYTOSOL AMINOPEPTIDASE protein, length: 503 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 4762
95 % 1 1 5557 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 1 1 5585
70 % 1 1 5492
50 % 3 4 2369
40 % 4 6 2099
30 % 6 8 1874

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures