Sequence Similarity Clusters for the Entities in PDB 1GYQ

Entity #1 | Chains: A,B,C,D
PROTEIN (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE) protein, length: 358 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 1834
95 % 5 5 2398 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 5 5 2458
70 % 12 12 1062
50 % 138 139 67
40 % 138 139 88
30 % 138 139 99

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.