Sequence Similarity Clusters for the Entities in PDB 1GYO

Entity #1 | Chains: A,B
CYTOCHROME C3, A DIMERIC CLASS III C-TYPE CYTOCHROME protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48087
95 % 1 1 35938 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.2
PDBFlex
90 % 1 1 34294
70 % 1 1 30470
50 % 1 1 25967
40 % 1 1 22873
30 % 7 32 1589

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures