Sequence Similarity Clusters for the Entities in PDB 1GYL

Entity #1 | Chains: A,B
GLYCOLATE OXIDASE protein, length: 369 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35548
95 % 4 4 14420 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.5
PDBFlex
90 % 4 4 14193
70 % 4 4 13336
50 % 9 9 4905
40 % 18 18 1953
30 % 26 26 885

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures