Sequence Similarity Clusters for the Entities in PDB 1GYL

Entity #1 | Chains: A,B
GLYCOLATE OXIDASE protein, length: 369 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 34353
95 % 4 4 13931 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.5
PDBFlex
90 % 4 4 13712
70 % 4 4 12900
50 % 9 9 4737
40 % 18 18 1872
30 % 26 26 861

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.