Sequence Similarity Clusters for the Entities in PDB 1GYK

Entity #1 | Chains: A,B,C,D,E
SERUM AMYLOID P-COMPONENT protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 13 312
95 % 8 13 457 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.3
PDBFlex
90 % 8 13 496
70 % 8 13 530
50 % 9 19 269
40 % 9 19 285
30 % 11 21 287

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.