Sequence Similarity Clusters for the Entities in PDB 1GYJ

Entity #1 | Chains: A,B
HYPOTHETICAL PROTEIN YDCE protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 14146
95 % 3 3 13417 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.7
PDBFlex
90 % 3 3 13199
70 % 3 3 12413
50 % 3 3 11070
40 % 3 3 10041
30 % 3 3 8751

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.