Sequence Similarity Clusters for the Entities in PDB 1GYH

Entity #1 | Chains: A,B,C,D,E,F
ARABINAN ENDO-1,5-ALPHA-L-ARABINOSIDASE A protein, length: 318 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 12423
95 % 1 3 9010 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 3 8931
70 % 1 3 8588
50 % 1 3 7820
40 % 4 10 4066
30 % 4 10 3755

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures