Sequence Similarity Clusters for the Entities in PDB 1GYD

Entity #1 | Chains: B
ARABINAN ENDO-1,5-ALPHA-L-ARABINOSIDASE A protein, length: 315 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 55201
95 % 2 3 8755 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 2 3 8687
70 % 2 3 8372
50 % 2 3 7612
40 % 9 10 3958
30 % 9 10 3655

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.