Sequence Similarity Clusters for the Entities in PDB 1GY3

Entity #1 | Chains: A,C
CELL DIVISION PROTEIN KINASE 2 protein, length: 299 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 353 364 20
95 % 368 379 32
90 % 368 379 34
70 % 368 379 42
50 % 391 404 55
40 % 427 460 41
30 % 3428 3751 2
Entity #2 | Chains: B,D
CYCLIN A2 protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 79 86 159
95 % 98 105 148 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.4
PDBFlex
90 % 102 109 152
70 % 102 109 173
50 % 102 109 204
40 % 102 109 227
30 % 107 115 224
Entity #3 | Chains: E,F
SUBSTRATE PEPTIDE protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.