Sequence Similarity Clusters for the Entities in PDB 1GXR

Entity #1 | Chains: A,B
TRANSDUCIN-LIKE ENHANCER PROTEIN 1 protein, length: 337 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 4855
95 % 1 4 5614 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.7
PDBFlex
90 % 1 4 5634
70 % 1 4 5542
50 % 1 4 5245
40 % 1 4 4939
30 % 1 4 4488

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures