Sequence Similarity Clusters for the Entities in PDB 1GXM

Entity #1 | Chains: A,B
PECTATE LYASE protein, length: 332 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 25579
95 % 1 3 16444 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 1 3 16112
70 % 1 3 15009
50 % 1 3 13188
40 % 1 3 11857
30 % 1 3 10227

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.