Sequence Similarity Clusters for the Entities in PDB 1GXL

Entity #1 | Chains: A,B,C,D
CHROMOSOME SEGREGATION SMC PROTEIN protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 21679
95 % 1 1 18796 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.8
PDBFlex
90 % 1 1 18327
70 % 1 1 16942
50 % 1 1 14721
40 % 1 1 13115
30 % 1 1 11242

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures