Sequence Similarity Clusters for the Entities in PDB 1GXL

Entity #1 | Chains: A,B,C,D
CHROMOSOME SEGREGATION SMC PROTEIN protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 24540
95 % 1 1 21749 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.8
PDBFlex
90 % 1 1 21091
70 % 1 1 19316
50 % 1 1 16711
40 % 1 1 14770
30 % 1 1 12376

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures