Sequence Similarity Clusters for the Entities in PDB 1GXF

Entity #1 | Chains: A,B
TRYPANOTHIONE REDUCTASE (OXIDIZED FORM) protein, length: 492 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 11791
95 % 3 5 6834 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 3 5 6817
70 % 18 28 709
50 % 18 28 776
40 % 62 88 261
30 % 125 162 140

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures