Sequence Similarity Clusters for the Entities in PDB 1GXD

Entity #1 | Chains: A,B
72 KDA TYPE IV COLLAGENASE protein, length: 631 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 23387
95 % 2 2 19934
90 % 2 2 19402
70 % 2 2 17912
50 % 2 2 15645
40 % 2 2 13989
30 % 2 2 12024
Entity #2 | Chains: C,D
METALLOPROTEINASE INHIBITOR 2 protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 14378
95 % 3 3 13532
90 % 6 6 8675
70 % 6 6 8297
50 % 6 6 7536
40 % 8 8 5098
30 % 8 8 4576

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.