Sequence Similarity Clusters for the Entities in PDB 1GXD

Entity #1 | Chains: A,B
72 KDA TYPE IV COLLAGENASE protein, length: 631 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 24748
95 % 2 2 21094
90 % 2 2 20503
70 % 2 2 18824
50 % 2 2 16381
40 % 2 2 14639
30 % 2 2 12554
Entity #2 | Chains: C,D
METALLOPROTEINASE INHIBITOR 2 protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 15206
95 % 3 3 14300
90 % 6 6 9192
70 % 6 6 8799
50 % 6 6 7962
40 % 8 8 5389
30 % 8 8 4834

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.