Sequence Similarity Clusters for the Entities in PDB 1GXC

Entity #1 | Chains: A,D,G,J
SERINE/THREONINE-PROTEIN KINASE CHK2 protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 23003
95 % 1 1 19807 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 1 1 19277
70 % 1 1 17796
50 % 1 1 15456
40 % 1 1 13750
30 % 1 1 11772
Entity #2 | Chains: B,E,H,K
SYNTHETIC PHOSPHOPEPTIDE protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures