Sequence Similarity Clusters for the Entities in PDB 1GXC

Entity #1 | Chains: A,D,G,J
SERINE/THREONINE-PROTEIN KINASE CHK2 protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 23536
95 % 1 1 20219 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 1 1 19662
70 % 1 1 18135
50 % 1 1 15730
40 % 1 1 13982
30 % 1 1 11957
Entity #2 | Chains: B,E,H,K
SYNTHETIC PHOSPHOPEPTIDE protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures