Sequence Similarity Clusters for the Entities in PDB 1GX7

Entity #1 | Chains: A
PERIPLASMIC [FE] HYDROGENASE LARGE SUBUNIT protein, length: 371 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 35487
95 % 1 2 28273
90 % 1 2 27288
70 % 1 2 24675
50 % 1 2 21203
40 % 1 2 18777
30 % 1 2 16048
Entity #2 | Chains: D
PERIPLASMIC [FE] HYDROGENASE SMALL SUBUNIT protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 49289
95 % 1 2 36743
90 % 1 2 35060
70 % 1 2 31136
50 % 1 2 26570
40 % 1 2 23430
30 % 1 2 19837
Entity #3 | Chains: E
CYTOCHROME C3 protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 5 14463
95 % 5 6 10181
90 % 5 6 10058
70 % 17 19 2972
50 % 18 22 2510
40 % 26 30 1851
30 % 28 32 1589

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures