Sequence Similarity Clusters for the Entities in PDB 1GX7

Entity #1 | Chains: A
PERIPLASMIC [FE] HYDROGENASE LARGE SUBUNIT protein, length: 371 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 35013
95 % 1 2 27906
90 % 1 2 26938
70 % 1 2 24373
50 % 1 2 20962
40 % 1 2 18569
30 % 1 2 15865
Entity #2 | Chains: D
PERIPLASMIC [FE] HYDROGENASE SMALL SUBUNIT protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 48654
95 % 1 2 36288
90 % 1 2 34639
70 % 1 2 30775
50 % 1 2 26282
40 % 1 2 23170
30 % 1 2 19611
Entity #3 | Chains: E
CYTOCHROME C3 protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 5 14216
95 % 5 6 10009
90 % 5 6 9889
70 % 17 19 2932
50 % 18 22 2474
40 % 26 30 1830
30 % 28 32 1567

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures