Sequence Similarity Clusters for the Entities in PDB 1GX7

Entity #1 | Chains: A
PERIPLASMIC [FE] HYDROGENASE LARGE SUBUNIT protein, length: 371 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 34034
95 % 1 2 27188
90 % 1 2 26265
70 % 1 2 23803
50 % 1 2 20485
40 % 1 2 18159
30 % 1 2 15525
Entity #2 | Chains: D
PERIPLASMIC [FE] HYDROGENASE SMALL SUBUNIT protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 47372
95 % 1 2 35374
90 % 1 2 33804
70 % 1 2 30083
50 % 1 2 25709
40 % 1 2 22675
30 % 1 2 19207
Entity #3 | Chains: E
CYTOCHROME C3 protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 5 13795
95 % 5 6 9755
90 % 5 6 9647
70 % 17 19 2840
50 % 18 22 2383
40 % 26 30 1762
30 % 28 32 1524

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.