Sequence Similarity Clusters for the Entities in PDB 1GWZ

Entity #1 | Chains: A
SHP-1 protein, length: 299 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 15384
95 % 7 7 8470 Flexibility: Low
Max RMSD: 5.6, Avg RMSD: 2.4
PDBFlex
90 % 7 7 8396
70 % 7 7 8083
50 % 15 16 3445
40 % 91 107 380
30 % 228 261 171

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures