Sequence Similarity Clusters for the Entities in PDB 1GWS

Entity #1 | Chains: A
HIGH-MOLECULAR-WEIGHT CYTOCHROME C protein, length: 545 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 11198
95 % 2 3 11132 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.2
PDBFlex
90 % 2 3 10986
70 % 2 3 10420
50 % 2 4 8592
40 % 3 5 6768
30 % 3 5 6036

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.