Sequence Similarity Clusters for the Entities in PDB 1GWS

Entity #1 | Chains: A
HIGH-MOLECULAR-WEIGHT CYTOCHROME C protein, length: 545 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 14971
95 % 2 3 14066 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.0
PDBFlex
90 % 2 3 13799
70 % 2 3 12913
50 % 2 4 9843
40 % 3 5 8087
30 % 3 5 7002

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures