Sequence Similarity Clusters for the Entities in PDB 1GWB

Entity #1 | Chains: A,B
PLATELET GLYCOPROTEIN IB ALPHA CHAIN protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35299
95 % 10 13 3488 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 1.4
PDBFlex
90 % 10 13 3557
70 % 10 13 3427
50 % 10 13 3340
40 % 10 13 3223
30 % 92 112 251

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures