Sequence Similarity Clusters for the Entities in PDB 1GVY

Entity #1 | Chains: A
MANNAN ENDO-1,4-BETA-MANNOSIDASE protein, length: 383 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 50021
95 % 4 6 11152 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 4 6 11003
70 % 4 6 10396
50 % 4 6 9366
40 % 4 6 8478
30 % 9 13 3838

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures