Sequence Similarity Clusters for the Entities in PDB 1GVY

Entity #1 | Chains: A
MANNAN ENDO-1,4-BETA-MANNOSIDASE protein, length: 383 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 52482
95 % 4 6 9959 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 4 6 9848
70 % 4 6 9350
50 % 4 6 8479
40 % 4 6 7776
30 % 9 13 3756

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.