Sequence Similarity Clusters for the Entities in PDB 1GVX

Entity #1 | Chains: A
ENDOTHIAPEPSIN protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 529 11
95 % 10 529 18 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.2
PDBFlex
90 % 10 529 20
70 % 10 529 27
50 % 11 548 69
40 % 11 556 86
30 % 12 1116 11
Entity #2 | Chains: I
INHIBITOR H256 protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures