Sequence Similarity Clusters for the Entities in PDB 1GVU

Entity #1 | Chains: A
ENDOTHIAPEPSIN protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 524 8
95 % 2 524 17 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.2
PDBFlex
90 % 2 524 18
70 % 2 524 26
50 % 3 543 53
40 % 3 551 63
30 % 4 717 31
Entity #2 | Chains: I
INHIBITOR, H189 protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.