Sequence Similarity Clusters for the Entities in PDB 1GVU

Entity #1 | Chains: A
ENDOTHIAPEPSIN protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 531 11
95 % 2 531 18 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.2
PDBFlex
90 % 2 531 21
70 % 2 531 29
50 % 3 550 74
40 % 3 558 92
30 % 4 1126 12
Entity #2 | Chains: I
INHIBITOR, H189 protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures