Sequence Similarity Clusters for the Entities in PDB 1GVP

Entity #1 | Chains: A
GENE V PROTEIN protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 28808
95 % 1 19 2789 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.5
PDBFlex
90 % 1 19 2832
70 % 1 19 2800
50 % 1 19 2767
40 % 1 19 2726
30 % 1 19 2548

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.