Sequence Similarity Clusters for the Entities in PDB 1GVP

Entity #1 | Chains: A
GENE V PROTEIN protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 15 3251
95 % 1 19 2974 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 1.1
PDBFlex
90 % 1 19 3056
70 % 1 19 3005
50 % 1 19 2955
40 % 1 19 2888
30 % 1 19 2668

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures