Sequence Similarity Clusters for the Entities in PDB 1GVM

Entity #1 | Chains: A,B,C,D,E,F
AUTOLYSIN protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 6530
95 % 3 3 7085 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.0
PDBFlex
90 % 3 3 7052
70 % 3 3 6841
50 % 3 3 6322
40 % 3 3 5893
30 % 3 3 5280

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.