Sequence Similarity Clusters for the Entities in PDB 1GVI

Entity #1 | Chains: A,B
MALTOGENIC AMYLASE protein, length: 588 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 31446
95 % 2 2 15583 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 2 2 15295
70 % 6 6 5281
50 % 6 7 4358
40 % 18 23 1240
30 % 27 32 1016

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures