Sequence Similarity Clusters for the Entities in PDB 1GVI

Entity #1 | Chains: A,B
MALTOGENIC AMYLASE protein, length: 588 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 31926
95 % 2 2 15819 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 2 2 15527
70 % 6 6 5363
50 % 6 7 4421
40 % 18 23 1259
30 % 27 32 1031

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures