Sequence Similarity Clusters for the Entities in PDB 1GVG

Entity #1 | Chains: A
CLAVAMINATE SYNTHASE 1 protein, length: 324 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 17657
95 % 3 5 16368 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 3 5 16024
70 % 3 5 14967
50 % 3 5 13176
40 % 3 5 11809
30 % 3 5 10039

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1DS1 1 A CLAVAMINATE SYNTHASE 1 CLAVAMINIC ACID SYNTHASE 1 (CAS1) 1901 1.14.11.21 | Details
2 1DRY 1 A CLAVAMINATE SYNTHASE 1 CLAVAMINIC ACID SYNTHASE 1 (CAS1) 1901 1.14.11.21 | Details
3 1GVG 1 A CLAVAMINATE SYNTHASE 1 1901 1.14.11.21 | Details
4 1DS0 1 A CLAVAMINATE SYNTHASE 1 CLAVAMINIC ACID SYNTHASE 1 (CAS1) 1901 1.14.11.21 | Details
5 1DRT 1 A CLAVAMINATE SYNTHASE 1 CLAVAMINIC ACID SYNTHASE 1 (CAS1) 1901 1.14.11.21 | Details