Sequence Similarity Clusters for the Entities in PDB 1GVG

Entity #1 | Chains: A
CLAVAMINATE SYNTHASE 1 protein, length: 324 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 18467
95 % 3 5 17098 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 3 5 16729
70 % 3 5 15540
50 % 3 5 13674
40 % 3 5 12256
30 % 3 5 10409

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures