Sequence Similarity Clusters for the Entities in PDB 1GVF

Entity #1 | Chains: A,B
TAGATOSE-BISPHOSPHATE ALDOLASE AGAY protein, length: 286 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36220
95 % 1 1 28286 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 27315
70 % 1 1 24750
50 % 1 1 21253
40 % 1 19 1141
30 % 1 20 1081

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.