Sequence Similarity Clusters for the Entities in PDB 1GVF

Entity #1 | Chains: A,B
TAGATOSE-BISPHOSPHATE ALDOLASE AGAY protein, length: 286 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 42898
95 % 1 1 35985 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 34367
70 % 1 1 30573
50 % 1 1 26042
40 % 2 30 861
30 % 3 52 493

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures