Sequence Similarity Clusters for the Entities in PDB 1GVC

Entity #1 | Chains: A
OVOTRANSFERRIN protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 30060
95 % 2 3 22123 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.9
PDBFlex
90 % 2 3 21450
70 % 2 3 19607
50 % 2 4 12849
40 % 2 4 11533
30 % 2 4 9801

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures