Sequence Similarity Clusters for the Entities in PDB 1GV4

Entity #1 | Chains: A,B
PROGRAMED CELL DEATH PROTEIN 8 protein, length: 528 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 32434
95 % 10 17 1819 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.4
PDBFlex
90 % 10 17 1856
70 % 10 17 1886
50 % 10 17 1913
40 % 10 17 1916
30 % 10 17 1847

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures