Sequence Similarity Clusters for the Entities in PDB 1GV4

Entity #1 | Chains: A,B
PROGRAMED CELL DEATH PROTEIN 8 protein, length: 528 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 30705
95 % 10 17 1720 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.3
PDBFlex
90 % 10 17 1752
70 % 10 17 1776
50 % 10 17 1798
40 % 10 17 1805
30 % 10 17 1747

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.