Sequence Similarity Clusters for the Entities in PDB 1GV1

Entity #1 | Chains: A,B,C,D
MALATE DEHYDROGENASE protein, length: 310 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 9375
95 % 2 2 9265 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 2 2 9163
70 % 2 3 6888
50 % 68 70 257
40 % 142 166 64
30 % 201 231 44

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures