Sequence Similarity Clusters for the Entities in PDB 1GUX

Entity #1 | Chains: A
RETINOBLASTOMA PROTEIN protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 15187
95 % 1 2 14284 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.6
PDBFlex
90 % 1 2 14038
70 % 1 2 13188
50 % 1 2 11726
40 % 1 2 10626
30 % 1 2 9229
Entity #2 | Chains: B
RETINOBLASTOMA PROTEIN protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 15536
95 % 1 2 14558
90 % 1 2 14284
70 % 1 2 13412
50 % 1 2 11921
40 % 1 2 10813
30 % 1 2 9389
Entity #3 | Chains: E
ONCOPROTEIN protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.