Sequence Similarity Clusters for the Entities in PDB 1GUX

Entity #1 | Chains: A
RETINOBLASTOMA PROTEIN protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 15946
95 % 1 2 14914 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.6
PDBFlex
90 % 1 2 14660
70 % 1 2 13742
50 % 1 2 12202
40 % 1 2 11039
30 % 1 2 9596
Entity #2 | Chains: B
RETINOBLASTOMA PROTEIN protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 16306
95 % 1 2 15194
90 % 1 2 14910
70 % 1 2 13970
50 % 1 2 12399
40 % 1 2 11229
30 % 1 2 9759
Entity #3 | Chains: E
ONCOPROTEIN protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures