Sequence Similarity Clusters for the Entities in PDB 1GUX

Entity #1 | Chains: A
RETINOBLASTOMA PROTEIN protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 15399
95 % 1 2 14465 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.6
PDBFlex
90 % 1 2 14220
70 % 1 2 13350
50 % 1 2 11865
40 % 1 2 10747
30 % 1 2 9341
Entity #2 | Chains: B
RETINOBLASTOMA PROTEIN protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 15747
95 % 1 2 14739
90 % 1 2 14464
70 % 1 2 13574
50 % 1 2 12062
40 % 1 2 10934
30 % 1 2 9501
Entity #3 | Chains: E
ONCOPROTEIN protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures