Sequence Similarity Clusters for the Entities in PDB 1GUX

Entity #1 | Chains: A
RETINOBLASTOMA PROTEIN protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 15666
95 % 1 2 14676 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.6
PDBFlex
90 % 1 2 14431
70 % 1 2 13537
50 % 1 2 12029
40 % 1 2 10895
30 % 1 2 9470
Entity #2 | Chains: B
RETINOBLASTOMA PROTEIN protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 16023
95 % 1 2 14955
90 % 1 2 14680
70 % 1 2 13766
50 % 1 2 12230
40 % 1 2 11086
30 % 1 2 9632
Entity #3 | Chains: E
ONCOPROTEIN protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures