Sequence Similarity Clusters for the Entities in PDB 1GUD

Entity #1 | Chains: A,B
D-ALLOSE-BINDING PERIPLASMIC PROTEIN protein, length: 288 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 19111
95 % 1 3 16933 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.2
PDBFlex
90 % 1 3 16585
70 % 1 3 15426
50 % 1 3 13514
40 % 1 3 12111
30 % 33 62 554

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.