Sequence Similarity Clusters for the Entities in PDB 1GUD

Entity #1 | Chains: A,B
D-ALLOSE-BINDING PERIPLASMIC PROTEIN protein, length: 288 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 19457
95 % 1 3 17247 Flexibility: Low
Max RMSD: 4.5, Avg RMSD: 2.6
PDBFlex
90 % 1 3 16895
70 % 1 3 15715
50 % 1 3 13753
40 % 1 3 12323
30 % 33 62 559

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.