Sequence Similarity Clusters for the Entities in PDB 1GUD

Entity #1 | Chains: A,B
D-ALLOSE-BINDING PERIPLASMIC PROTEIN protein, length: 288 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 19152
95 % 1 3 17485 Flexibility: Low
Max RMSD: 4.5, Avg RMSD: 2.6
PDBFlex
90 % 1 3 17064
70 % 1 3 15820
50 % 1 3 13863
40 % 1 3 12399
30 % 36 72 529

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures