Sequence Similarity Clusters for the Entities in PDB 1GUB

Entity #1 | Chains: A
D-ALLOSE-BINDING PERIPLASMIC PROTEIN protein, length: 288 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 19599
95 % 3 3 17359 Flexibility: Low
Max RMSD: 4.5, Avg RMSD: 2.6
PDBFlex
90 % 3 3 17010
70 % 3 3 15801
50 % 3 3 13828
40 % 3 3 12388
30 % 62 62 564

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.