Sequence Similarity Clusters for the Entities in PDB 1GU5

Entity #1 | Chains: A,B
CAAT/ENHANCER BINDING PROTEIN BETA protein, length: 78 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 5198
95 % 5 8 4074
90 % 5 8 4098
70 % 5 8 4017
50 % 5 8 3889
40 % 5 8 3732
30 % 5 8 3460
Entity #2 | Chains: C
5'-D(*TP*TP*GP*TP*GP*TP*TP*GP*GP*CP* CP*AP*AP*TP*CP*A)-3' dna, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: D
5'-D(*AP*TP*GP*AP*TP*TP*GP*GP*CP*CP* AP*AP*CP*AP*CP*A)-3' dna, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.