Sequence Similarity Clusters for the Entities in PDB 1GTS

Entity #1 | Chains: B
TRNAGLN rna, length: 74 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
PROTEIN (GLUTAMINYL-TRNA SYNTHETASE (E.C.6.1.1.18)) protein, length: 553 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 16 4123
95 % 10 19 3630 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 0.7
PDBFlex
90 % 10 19 3685
70 % 10 19 3633
50 % 13 24 2631
40 % 13 24 2581
30 % 13 24 2409

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures