Sequence Similarity Clusters for the Entities in PDB 1GTS

Entity #1 | Chains: B
TRNAGLN rna, length: 74 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
PROTEIN (GLUTAMINYL-TRNA SYNTHETASE (E.C.6.1.1.18)) protein, length: 553 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 14 3794
95 % 10 19 3241 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 0.7
PDBFlex
90 % 10 19 3287
70 % 10 19 3248
50 % 11 21 2723
40 % 11 21 2677
30 % 11 21 2515

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.