Sequence Similarity Clusters for the Entities in PDB 1GTL

Entity #1 | Chains: 1,2
KUMAMOLYSIN protein, length: 357 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 10597
95 % 6 6 7872 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 12 12 3647
70 % 12 12 3597
50 % 12 12 3498
40 % 12 12 3380
30 % 21 21 2168
Entity #2 | Chains: 3,4
ALDEHYDE INHIBITOR protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures