Sequence Similarity Clusters for the Entities in PDB 1GTK

Entity #1 | Chains: A
PORPHOBILINOGEN DEAMINASE protein, length: 313 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 26557
95 % 1 5 14136 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 5 13910
70 % 1 6 11081
50 % 1 6 9948
40 % 4 16 2973
30 % 4 16 2787

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures