Sequence Similarity Clusters for the Entities in PDB 1GTJ

Entity #1 | Chains: 1,2
KUMAMOLYSIN protein, length: 357 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 9949
95 % 4 6 7400 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 5 12 3419
70 % 5 12 3369
50 % 5 12 3294
40 % 5 12 3196
30 % 13 21 2052
Entity #2 | Chains: 3,4
ALDEHYDE INHIBITOR protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.