Sequence Similarity Clusters for the Entities in PDB 1GTH

Entity #1 | Chains: A,B,C,D
DIHYDROPYRIMIDINE DEHYDROGENASE protein, length: 1025 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 3055
95 % 4 5 2972 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.7
PDBFlex
90 % 4 5 3018
70 % 4 5 2995
50 % 4 5 2950
40 % 4 5 2913
30 % 4 5 2725

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.