Sequence Similarity Clusters for the Entities in PDB 1GTF

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V
TRP RNA-BINDING ATTENUATION PROTEIN (TRAP) protein, length: 74 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 22 30
95 % 1 23 37
90 % 1 23 42
70 % 5 29 38
50 % 5 29 67
40 % 5 29 83
30 % 5 29 98
Entity #2 | Chains: W
(GAGUU)10GAG 53-NUCLEOTIDE RNA rna, length: 55 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.