Sequence Similarity Clusters for the Entities in PDB 1GSM

Entity #1 | Chains: A
MUCOSAL ADDRESSIN CELL ADHESION MOLECULE-1 protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 16476
95 % 3 6 8864 Flexibility: Low
Max RMSD: 4.5, Avg RMSD: 2.4
PDBFlex
90 % 3 6 8780
70 % 3 6 8330
50 % 3 6 7323
40 % 3 6 6760
30 % 3 6 5891

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures