Sequence Similarity Clusters for the Entities in PDB 1GSG

Entity #1 | Chains: T
TRNAGLN rna, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: P
GLUTAMINYL-TRNA SYNTHETASE protein, length: 553 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 16 3855
95 % 19 19 3431 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 0.7
PDBFlex
90 % 19 19 3494
70 % 19 19 3434
50 % 21 21 2895
40 % 21 21 2820
30 % 21 21 2604

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures