Sequence Similarity Clusters for the Entities in PDB 1GSD

Entity #1 | Chains: A,B,C,D
GLUTATHIONE TRANSFERASE A1-1 protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 11 1683
95 % 25 28 610 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 30 33 351
70 % 37 40 347
50 % 42 49 310
40 % 42 49 344
30 % 226 255 55

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures