Sequence Similarity Clusters for the Entities in PDB 1GS9

Entity #1 | Chains: A
APOLIPOPROTEIN E protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 26014
95 % 1 3 22942 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.4
PDBFlex
90 % 1 3 22214
70 % 1 3 20268
50 % 1 3 17459
40 % 1 3 15445
30 % 1 3 12931

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures